ADAPTIVE
DYNAMICS PAPERS
This page
contains some references to the development and applications of adaptive dynamics,
with a strong bias towards stochastic trait substitution sequences and evolutionary
branching. The list is not exhaustive even in this narrow scope, and I take no
responsibility for missing references. If you would like to have a paper included,
please alert me at firstname.lastname@helsinki.fi. Since this page is also intended
to help course students, I include a few publications outside the scope of adaptive
dynamics which are useful in relation to the population dynamics of invading
mutants, the connection to speciation models, etc.
Last
updated: 17/11/2011 | Maintained by: Eva Kisdi
If you want to read just one
paper:
Geritz, S. A.
H., É. Kisdi, G. Meszéna, and J. A. J. Metz. 1998. Evolutionarily singular
strategies and the adaptive growth and branching of the evolutionary tree.
Evol. Ecol. 12:35-57.
Adaptive
dynamics framework of Geritz & Metz
Geritz, S. A. H., É. Kisdi, G. Meszéna, and J. A. J. Metz.
1998. Evolutionarily singular strategies and the adaptive growth and branching
of the evolutionary tree. Evol. Ecol. 12:35-57.
Geritz, S. A. H., J. A. J. Metz, É. Kisdi, and G.
Meszéna. 1997. Dynamics of adaptation and evolutionary branching. Phys. Rev.
Letters 78:2024-2027.
Metz, J. A. J., S. A. H. Geritz, G. Meszéna, F. J. A.
Jacobs, and J. S. van Heerwaarden. 1996. Adaptive dynamics, a geometrical study
of the consequences of nearly faithful reproduction. Pp. 183-231 in S.
J. van Strien, and S. M. Verduyn Lunel, eds. Stochastic and spatial structures
of dynamical systems. North Holland, Amsterdam, The Netherlands.
Eshel, I., U. Motro, and E. Sansone. 1997. Continuous
stability and evolutionary convergence. J. theor. Biol. 185:333-343.
The first paper above gives a self-contained
description of the adaptive dynamics framework and an illustrative example for
how it can be used. The second paper is a short account specifically tailored
for the interest of physicists; the third paper is more mathematical. Eshel et
al. reached some of the results independently.
Geritz, S. A. H., É. Kisdi, G. Meszéna, and J. A. J. Metz. 2004. Adaptive dynamics of speciation: Ecological underpinnings. Pp. 54-75 in U. Dieckmann, M. Doebeli, J. A. J. Metz, and D. Tautz, eds. Adaptive speciation. Cambridge University Press. PDF
Kisdi É. & M. Gyllenberg. 2004. On some misconceptions about adaptive dynamics. TUCS Technical Report 624 (ISBN 952-12-1417-1)
Meszéna G., M. Gyllenberg, F. J. Jacobs & J. A. J. Metz. 2005. Link between population dynamics and dynamics of Darwinian evolution. Phys. Rev. Letters PRL 95, 078105.
Durinx M., J. A. J. Metz & G. Meszéna. 2008. Adaptive dynamics for physiologically structured population models. J. Math. Biol. 56: 673-742.
Kisdi É. & S. A. H. Geritz. 2010. Adaptive dynamics: A framework to model evolution in the ecological theatre. J. Math. Biol. (Perspectives in Mathematical Biology) 61: 165-169.
Metz J.A.J. 2011. Thoughts on the geometry of meso-evolution: Collecting mathematical elements for a postmodern synthesis. In: Fabio A. C. C. Chalub & José Francisco Rodrigues (eds): The Mathematics of Darwin's Legacy, Springer Verlag, pp. 193-232.
Target review:
Waxman D. and S. Gavrilets. 2005. 20 Questions on Adaptive Dynamics. J. evol. Biol. 18:1139-1154.
accompanied by 15 commentaries in JEB vol. 15(8); see Table of Contents
Books:
Dieckmann U., J. A. J. Metz, M. W. Sabelis & K. Sigmund (eds). 2002. Adaptive dynamics of infectious diseases: In pursuit of virulence management. Cambridge University Press, Cambridge
Dieckmann U., M. Doebeli, J. A. J. Metz & D. Tautz (eds). 2004. Adaptive speciation. Cambridge University Press, Cambridge
Dercole F. & S. Rinaldi. 2008. Analysis of evolutionary processes. Princeton University Press, Princeton
Evolutionary stability and convergence
stability
Maynard Smith J. 1982. Evolution and the theory of
games. Cambridge University Press
Eshel I. 1983. Evolutionary and continuous stability.
J. theor. Biol. 103:99-111.
Taylor
P.D. 1989. Evolutionary stability in
one-parameter models under weak selection. Theor. Pop. Biol. 36:125-143.
Nowak M. 1990. An evolutionary stable strategy may be
inaccessible. J.theor.Biol. 142:237-241.
Christiansen F. B. 1991. On conditions for
evolutionary stability for a continuously varying character. Am. Nat.
138:37-50.
Abrams P. A., H. Matsuda & Y. Harada. 1993.
Evolutionarily unstable fitness maxima and stable fitness minima of continuous
traits. Evol. Ecol. 7:465-487..
Doebeli M. & I. Ispolatov. 2010.
Continuously stable strategies as evolutionary branching points. J. theor. Biol. 266: 529-535..
The canonical equation. Convergence stability in more than one dimensions
Dieckmann U. & R. Law. 1996. The dynamical theory
of coevolution: A derivation from stochastic ecological processes. J. Math.
Biol. 34:579-612.
Matessi C. & Di Pasquale. 1996. Long-term evolution of multilocus traits. J. Math. Biol. 34:613-653.
Leimar O. Multidimensional convergence stability and the canonical adaptive dynamics.
In: U. Dieckmann & J.A.J. Metz (eds):
Elements of adaptive dynamics. Cambridge University Press, in press
Leimar O. 2001. Evolutionary change and Darwinian demons. Selection 2:65-72.
Leimar O. 2005. The evolution of phenotypic polymorphism: Randomized strategies versus evolutionary branching. Am. Nat. 165:669-681.
Leimar O. 2009. Multidimensional convergence stability. Evol. Ecol. Res. 11: 191-208.
Dercole F. & S. Rinaldi. 2008. Analysis of evolutionary processes. The adaptive dynamics approach and its applications. Princeton University Press, Princeton.
The paper of Dieckmann and Law contains the derivation of the canonical equation of mutation-limited evolution. Towards the end of their paper, Matessi and Di Pasquale give all generic two-dimensional evolutionary singularities (for two independently evolving traits or equivalently for two coevolving strategies) and investigate their absolute convergence. The papers of Leimar deal with strong convergence (convergence of nonindependent traits with any constant covariance matrix) as well as absolute convergence. The book of Dercole and Rinaldi discusses the canonical equation and evolutionary bifurcation theory along with many applications.
Champagnat N., R. Ferriere and G. Ben Arous. 2001. The canonical equation of adaptive dynamics: a mathematical view. Selection 2:73-84.
Champagnat N., R. Ferriere & S. Méléard. 2006. Unifying evolutionary dynamics: From individual stochastic processes to macroscopic models. Theor. Pop. Biol. 69:297-321.
Durinx M. & J. A. J. Metz. 2005. Multi-type branching processes and adaptive dynamics of structured populations. In: P. Haccou, P. Jagers & V. Vatutin: Branching processes: Variation, growth and extinction of populations. Cambridge Studies in Adaptive Dynamics 5, Cambridge University Press, pp. 266-277.
Durinx M., J. A. J. Metz & G. Meszéna. 2008. Adaptive dynamics for physiologically structured population models. J. Math. Biol. 56: 673-742.
Meleard S. & V. C. Tran. 2009. Trait substitution sequence process and canonical equation for age-structured populations. J. Math. Biol. 58: 881-921.
S. Meleard. 2011. Random modeling of adaptive dynamics and evolutionary branching. In: Fabio A. C. C. Chalub & José Francisco Rodrigues (eds): The Mathematics of Darwin's Legacy, Springer Verlag, pp. 175-192.
Diekmann, O., P.-E. Jabin, S. Mischler & B. Perthame. 2005.
The dynamics of adaptation: An illuminating example and a Hamilton-Jacobi approach.
Theor. Pop. Biol. 67:257-271.
7:198-202.
Cressman, R. & J. Hofbauer. 2005. Measure dynamics on a one-dimensional continuous trait space: Theoretical foundations for adaptive dynamics. Theor. Pop. Biol. 67:47-59.
Champagnat N., R. Ferriere & S. Méléard. 2006. Unifying evolutionary dynamics: From individual stochastic processes to macroscopic models. Theor. Pop. Biol. 69:297-321.
Champagnat N., R. Ferriere & S. Méléard. 2008. From individual stochastic processes to macroscopic models in adaptive evolution. Stochastic Models 24: 2-44.
Metz, J. A. J., R. M. Nisbet & S. A. H. Geritz. 1992.
How should we define 'fitness' for general ecological scenarios? TREE
7:198-202.
Metz
J.A.J., A.M. de Roos. 1992. The role of physiologically
structured population models within a general individual-based modeling
perspective. In: D.L. DeAngelis & L.J. Gross (eds): Individual-based models
and approaches in ecology, Chapman & Hall, New York
Caswell H. 1989. Matrix population models. Sinauer Associates, Sunderland.
Metz J. A. J. & O. Leimar. 2011. A simple fitness proxy for structured populations with continuous traits, with case studies on the evolution of haplo-diploids and genetic dimorphisms. J. Biol. Dyn. 5: 163-190.
Gyllenberg M., and J. A. J. Metz. 2001. On fitness in
structured metapopulations. Journal of Mathematical Biology 43:545-560.
Metz J. A. J., and M. Gyllenberg. 2001. How should we
define fitness in structured metapopulation models? Including an application to
the calculation of evolutionarily stable dispersal strategies. Proceedings of
the Royal Society of London B 268:499-508.
Parvinen, K. 2006. Evolution of dispersal in a structured metapopulation model in discrete time. Bull. Math. Biol. 68:655-678. (see Appendix A)
Parvinen, K. & J. A. J. Metz. 2008. A novel fitness proxy in structured locally finite metapopulations with diploid genetics, with an application to dispersal evolution. Theor. Pop. Biol. 73: 517-528.
Van Baalen M. & D. A. Rand. 1998. The unit of
selection in viscous populations and the evolution of altruism. J. theor. Biol.
193:631-648. pair approximation in lattice models
Ferriere R. & M. Gatto. 1995. Lyapunov
exponents and the mathematics of invasion in oscillatory or chaotic
populations. Theor.Pop. Biol. 48:126-171.
Kisdi É. & G. Meszéna. 1993. Density dependent
life history evolution in fluctuating environments. In: J. Yoshimura & C.
Clark (eds): Adaptation in a stochastic environment. Lecture Notes in
Biomathematics, Springer-Verlag, Vol. 98 pp. 26-62. fitness
in stochastic environments
Tuljapurkar S. 1989. An uncertain life: Demography in
random environments. Theor. Pop. Biol. 35:227-294. structured populations in
stochastic environments
Does invasion imply fixation?
Adaptive dynamics with multiple population dynamical attractors
Rand D. A., H. B. Wilson & J. M. McGlade. 1994.
Dynamics and evolution: Evolutionarily stable attractors, invasion exponents
and phenotype dynamics. Phil. Trans. R. Soc. Lond. B 343:261-283.
Geritz S. A. H., M. Gyllenberg, F. J. A. Jacobs & K. Parvinen. 2002. Invasion dynamics and attractor inheritance. J. Math. Biol. 44:548-560; also available as a TUCS preprint
Geritz S. A. H. 2005.
Resident-invader dynamics and the coexistence of similar strategies. J. Math. Biol. 50:67-82.
Dercole F. & S. Rinaldi. 2008. Analysis of evolutionary processes. The adaptive dynamics approach and its applications. Princeton University Press, Princeton.
Evolutionary conservation biology
Johansson J. & U. Dieckmann. 2009. Evolutionary responses of communities to extinctions. Evol. Ecol. Res. 11: 561-588.
Gyllenberg M. & K. Parvinen. 2001. Necessary and
sufficient conditions for evolutionary suicide. Bull. Math. Biol. 63:981-993
Gyllenberg M., K. Parvinen & U. Dieckmann. 2002.
Evolutionary suicide and evolution of dispersal in structured metapopulations.
J. Math. Biol. 45:79-105; IIASA Interim Report
IR-00-056
Parvinen K. 2005. Evolutionary suicide. Acta Biotheoretica 53:241-264.
Parvinen K., U. Dieckmann & M. Heino. 2006. Function-valued adaptive dynamics and the calculus of variations. J. Math. Biol. 52:1-26.
Dieckmann U., M. Heino & K. Parvinen. 2006. The adaptive dynamics of function-valued traits. J. theor. Biol. 241:370-389.
Adaptive dynamics and optimization
Mylius S.D. & O. Diekmann. 1995. On evolutionarily stable life histories, optimization and the need to be specific about density dependence. Oikos 74: 218-224.
Metz J.A.J., S.D. Mylius & O. Diekmann. 2008. When Does Evolution Optimize? Evol. Ecol. Res. 10: 629-654.
For over a decade, this paper was available as the main part of the preprint
Metz J.A.J., S.D. Mylius & O. Diekmann. 1996. When
Does Evolution Optimize? On the Relation Between Types of Density Dependence
and Evolutionarily Stable Life History Parameters. IIASA Working
Paper WP-96-004
Kisdi E. 1998. Frequency dependence versus optimization. TREE 13: 508.
G.
Meszéna, É. Kisdi, U. Dieckmann, S.A.H. Geritz
& J.A.J. Metz (2001): Evolutionary optimisation models and matrix games in the
unified perspective of adaptive dynamics. Selection 2:193-210. PDF (Courtesy of Akadémiai Kiadó, Budapest)
Gyllenberg M., J.A.J. (Hans) Metz & R. Service. 2011. When do optimisation arguments make evolutionary sense? In: Fabio A. C. C. Chalub & José Francisco Rodrigues (eds): The Mathematics of Darwin's Legacy, Springer Verlag, pp. 233-268.
Adaptive
dynamics and matrix games
G.
Meszéna, É. Kisdi, U. Dieckmann, S.A.H. Geritz
& J.A.J. Metz (2001): Evolutionary optimisation models and matrix games in the
unified perspective of adaptive dynamics. Selection 2:193-210. PDF (Courtesy of Akadémiai Kiadó, Budapest)
Dieckmann U. & J. A. J. Metz. 2006. Surprising evolutionary predictions from enhanced ecological realism. Theor. Pop. Biol. 69:263-281.
Evolutionary
bifurcation theory
Geritz S. A. H., E. van der Meijden & J. A. J. Metz. 1999. Evolutionary dynamics of seed size and seedling competitive
ability. Theor. Pop. Biol. 55:324-343.
This paper provides a detailed
bifurcation analysis of adaptive dynamics in a specific model, and also
describes some bifurcation structures as well as the connection points between
isoclines and the boundary of the area of coexistence in general.
Rueffler C., T. J. M. van Dooren & J. A. J.
Metz. 2004. Adaptive walks on changing landscapes: Levins' approach extended.
Theor. Pop. Biol. 65:165-178.
de Mazancourt C. & U. Dieckmann. 2004. Trade-off geometries and frequency-dependent selection. Am. Nat. 164:765-778.
Bowers R. G., A. Hoyle, A. White & M. Boots. 2005. The geometric theory of adaptive evolution: Trade-off and invasion plots. J. theor. Biol. 233:363-377.
Kisdi É. 2006. Trade-off geometries and the adaptive dynamics of two co-evolving species. Evol. Ecol. Res. 8: 959-973.
Dercole F. & S. Rinaldi. 2008. Analysis of evolutionary processes. The adaptive dynamics approach and its applications. Princeton University Press, Princeton.
Priklopil T. On invasion boundaries and the unprotected coexistence of two strategies. J. Math. Biol. in press, DOI 10.1007/s00285-011-0448-y.
The role of
environmental dimensionality
Meszéna, G., and J. A. J. Metz. The role of effective
environmental dimensionality. In: U. Dieckmann, and J. A. J. Metz (eds.):
Elements of adaptive dynamics, Cambridge University Press, in press; see
IIASA Interim Report
IR-99-045
Metz
J.A.J., Mylius S.D. & Diekmann O. 2008. When Does Evolution Optimize? Evol. Ecol. Res. 10: 629-654;
see also
IIASA Working Paper WP-96-004 (1996)
Evolution in finite populations
Proulx S. R. & T. Day. 2001. What can invasion
analyses tell us about evolution under stochasticity in finite populations? Selection
2:1-16.
Rousset F. 2003. A minimal derivation of convergence stability measures. J. theor. Biol. 221:665-668.
Johansson J. & J. Ripa. 2006. Will sympatric speciation fail due to stochastic competitive exclusion? Am. Nat. 168:572-578.
Claessen D., J. Andersson, L. Persson & A. M. de Roos. 2007. Delayed evolutionary branching in small populations. Evol. Ecol. Res. 9:51-69.
Claessen D., J. Andersson, L. Persson & A. M. de Roos. 2008. The effect of population size and recombination on delayed evolution of polymorphism and speciation in sexual populations. Am. Nat. 172:E18-E34.
Johansson J., J. Ripa & N. Kucklander. 2010. The risk of competitive exclusion during evolutionary branching: Effects of resource variability, correlation and autocorrelation. Theor. Pop. Biol. 77: 95-104.
Szilágyi A. & G. Meszéna. 2010. Coexistence in a fluctuating environment by the effect of relative nonlinearity: A minimal model. J. theor. Biol. 267: 502-512.
Dieckmann U., P. Marrow & R. Law. 1995.
Evolutionary cycling in predator-prey interactions: Population dynamics and the
Red Queen. J. theor. Biol. 176:91-102.
Geritz, S. A. H., É. Kisdi, G. Meszéna, and J. A. J.
Metz. 1998. Evolutionarily singular strategies and the adaptive growth and
branching of the evolutionary tree. Evol. Ecol. 12:35-57.
Kisdi E. & S. A. H. Geritz. 1999. Adaptive
dynamics in allele space: Evolution of genetic polymorphism by small mutations
in a heterogeneous environment. Evolution 53:993-1008.
Adaptive dynamics of alleles in diploid populations
Kisdi E. & S. A. H. Geritz. 1999. Adaptive
dynamics in allele space: Evolution of genetic polymorphism by small mutations
in a heterogeneous environment. Evolution 53:993-1008.
Van Dooren T. J. M. 1999. The evolutionary ecology of
dominance-recessivity. J. theor. Biol. 198:519-532.
see also a two locus - two allele population genetic model:
Peischl S. & R. Burger. 2008.
Evolution of dominance under frequency-dependent intraspecific competition. J. theor. Biol. 251: 210-226.
Van Dooren T. J. M. 2000. The evolutionary dynamics of direct phenotypic overdominance: Emergence possible, loss probable. Evolution 54: 1899-1914.
Van Doorn S. & U. Dieckmann 2006. The long-term evolution of multi-locus traits under frequency-dependent disruptive selection. Evolution 60:2226-2238.
Proulx S. R. & P. C. Phillips. 2006. Allelic divergence precedes and promotes gene duplication. Evolution 60: 881-892.
Van Dooren T. J. M. 2006. Protected polymorphism and evolutionary stability in pleiotropic models with trait-specific dominance. Evolution 60: 1991-2003.
Phenotypic diversification without speciation
Maire N., M. Ackermann & M. Doebeli. 2001.
Evolutionary branching and the evolution of anisogamy. Selection 2:119-132.
Bolnick D. I. & M. Doebeli. 2003. Sexual dimorphism
and adaptive speciation: Two sides of the same ecological coin. Evolution
57:2433-2449.
Van Dooren T. J. M., M. Durinx & I. Demon. 2004. Sexual dimorphism or evolutionary branching? Evol. Ecol. Res. 6:857-871.
Leimar O. 2005. The evolution of phenotypic polymorphism: Randomized strategies versus evolutionary branching. Am. Nat. 165:669-681.
Matessi C. & A. Gimelfarb. 2006. Discrete polymorphisms due to disruptive selection on a continuous trait. I. The one-locus case. Theor. Pop. Biol. 69:283-295.
Rueffler C., T. J. M. van Dooren, O. Leimar & P. A. Abrams. 2006. Disruptive selection and then what? Trends Ecol. Evol. 21:238-245.
Durinx M. & T. J. M. van Dooren. 2009. Assortative mate choice and dominance modification: Alternative ways of removing heterozygote disadvantage. Evolution 63: 334-352.
Adaptive
dynamics and multilocus / quantitative genetics
Loeschcke V. & F. B. Christiansen. 1984. Evolution
and intraspecific exploitative competition. II. A two-locus model for additive
gene effects. Theor. Pop. Biol. 26:228-264.
Taper
M.L. and T.J. Case. 1992. Models of character
displacement and the theoretical robustness of taxon cycles. Evolution 46:
317-333.
Abrams P.A., Y. Harada & H. Matsuda. 1993. On the
relationship between quantitative genetic and ESS models. Evolution 47:
982-985.
Spichtig M. & T. J. Kawecki. 2004. The maintenance (or not) of polygenic variation by soft selection in heterogeneous
environments. Am. Nat. 164:70-84. This
paper demonstrates that polymorphism is maintained in many loci when the
corresponding adaptive dynamics model has an evolutionary branching point, and
also shows how the results change if several, but not infinitely many, loci
affect the trait.
Bürger R. & A. Gimelfarb. 2004. The effects of intraspecific competition and
stabilizing selection on a polygenic trait. Genetics 167: 1425-1443.
Bürger R. 2005. A multilocus analysis of intraspecific competition and stabilizing
selection on a quantitative trait. J. Math. Biol. 50: 355-396.
Bürger R & K. Schneider. 2006. Intraspecific competitive divergence and convergence
under assortative mating. Am. Nat. 167: 190-205.
Kopp M. & J. Hermisson. 2006. The evolution of genetic architecture under
frequency-dependent disruptive selection. Evolution 60: 1537-1550.
Evolutionary branching vs sympatric speciation
Dieckmann U. & M. Doebeli. 1999. On the origin of
species by sympatric speciation. Nature 400:354-357.
Geritz S. A. H. & E. Kisdi. 2000. Adaptive
dynamics in diploid, sexual populations and the evolution of reproductive
isolation. Proc. R. Soc. Lond. B 267:1671-1678.
Doebeli M. & U. Dieckmann. 2000. Evolutionary
branching and sympatric speciation caused by different types of ecological
interactions. Am. Nat. 156:S77-S101.
Drossel B. & A. McKane. 2000. Competitive
speciation in quantitative genetic models. J. theor. Biol. 204:467-478.
Van Doorn G. S. & F. J. Weissing. 2001. Ecological
versus sexual selection models of sympatric speciation: a synthesis. Selection 2:17-40.
Van Doorn G. S., P. C. Luttikhuizen & F. J.
Weissing. 2001. Sexual selection at the protein level drives the extraordinary
divergence of sex-related genes during sympatric speciation. Proc. R. Soc.
Lond. B 268:2155-2161.
Matessi C., A. Gimelfarb & S. Gavrilets. 2001.
Long term buildup of reproductive isolation promoted by disruptive selection:
how far does it go? Selection 2:41-64.
Bolnick D. I. 2004. Waiting for sympatric speciation. Evolution 58:895-899.
Van Doorn G. S., U. Dieckmann & F. J. Weissing. 2004. Sympatric speciation by sexual selection: A critical reevaluation. Am. Nat. 163: 709-725.
Doebeli M. 2005. Adaptive speciation when assortative mating is based on female preference for male marker traits. J. evol. Biol. 18:1587-1600.
Polechova J. & N. H. Barton. 2005. Speciation through competition: A critical review. Evolution 59:1194-1210.
Bolnick D. I. 2006. Multi-species outcomes in a common model of sympatric speciation. J. theor. Biol. 241:734-744.
Schneider K. A. & R. Bürger. 2006. Does competitive divergence occur if assortative mating is costly? J. evol. Biol. 19:570-588.
Doebeli M., H. J. Blok, O. Leimar & U. Dieckmann. 2007. Multimodal pattern formation in phenotype distributions of sexual populations. Proc. R. Soc. Lond. B 274:347-357.
Pennings P. S., M. Kopp, G. Meszéna, U. Dieckmann & J. Hermisson. 2008. An analytically tractable model for competitive speciation. Am. Nat. 171: E44-E71.
Kopp, M. & J. Hermisson. 2008. Competitive speciation and costs of choosiness. J. evol. Biol. 21:1005-1023.
Ripa J. 2009. When is sympatric speciation truly adaptive? An analysis of the joint evolution of resourve utilization and assortative mating. Evol. Ecol. 23: 31-52.
Kisdi E. & T. Priklopil. 2011. Evolutionary branching of a magic trait. J. Math. Biol. 63: 361-397.
Evolutionary
branching and speciation along environmental gradients
Doebeli M. & U. Dieckmann. 2003. Speciation along
environmental gradients. Nature 421:259-264.
Mizera F. & G. Meszéna. 2003. Spatial niche
packing, character displacement and adaptive speciation along an environmental
gradient. Evol. Ecol. Res. 5:363-382.
Leimar O., M. Doebeli & U. Dieckmann. 2008. Evolution of phenotypic clusters through
competition and local adaptation along an environmental gradient. Evolution 62: 807-822.
Heinz S. K., R. Mazzucco & U. Dieckmann. 2009. Speciation and the evolution of dispersal along environmental gradients. Evol. Ecol. 23: 53-70.
Ispolatov J. & M. Doebeli. 2009. Diversification along environmental gradients in spatially structured populations. Evol. Ecol. Res. 11: 295-304.
Payne J. L., R. Mazzucco & U. Dieckmann. 2009. The evolution of conditional dispersal and reproductive isolation along environmental gradients. J. theor. Biol. 273: 147-155.
How to deal with
multilocus genetics
The papers
listed here are of course outside the scope of adaptive dynamics, but they
provide valuable background to multilocus genetic simulations that e.g. explore
the connection between evolutionary branching and sympatric speciation, and
they were included in a course given on adaptive dynamics.
Barton N. H. & M. Turelli. 1991. Natural and
sexual selection on many loci. Genetics 127:229-255. The general theory of multilocus
selection, and the quasi-linkage equilibrium approximation for weak selection
Kirkpatrick M. & M. R. Servedio. 1999. The reinforcement
of mating preferences on an island. Genetics 151:865-884. A model that utilises the Barton-Turelli
approach with quasi-linkage equilibrium. It may be easier to start with an
example like this than with the general framework
Shpak M. & A. S. Kondrashov. 1999. Applicability
of the hypergeometric phenotypic model to haploid and diploid populations.
Evolution 53:600-604. phenotypic
recursion based on the hypergeometric model
Applications (the list is not exhaustive!)
* indicates evolutionary branching.
Papers on the
symmetric Lotka-Volterra competition model are listed separately (see below).
See also chapters in the book series Cambridge Studies
in Adaptive Dynamics
1997-1998
*
Meszéna, G., I. Czibula, and S. A. H. Geritz. 1997.
Adaptive dynamics in a 2-patch environment: A toy model for allopatric and
parapatric speciation. J. Biol. Syst. 5:265-284; also available as IIASA Interim Report
IR-97-001
*
Doebeli, M., and G. D. Ruxton. 1997. Evolution of
dispersal rates in metapopulation models: Branching and cyclic dynamics in
phenotype space. Evolution 51:1730-1741.
Law R. & U. Dieckmann. 1998. Symbiosis through
exploitation and the merger of lineages in evolution. Proc. R. Soc. Lond. B
265:1245-1253.
Van Dooren T. J. M. & J. A. J. Metz. 1998. Delayed
maturation in temporally structured populations with non-equilibrium dynamics.
J. evol. Biol. 11:41-62.
1999
* Boots M. & Y. Haraguchi. 1999. The evolution of
costly resistance in host-parasite systems. Am. Nat. 153:359-370.
* Geritz, S. A. H., E. van der Meijden, and J. A. J.
Metz. 1999. Evolutionary dynamics of seed size and seedling competitive
ability. Theor. Pop. Biol. 55:324-343.
* Kisdi, É. 1999. Evolutionary branching under
asymmetric competition. J. theor. Biol. 197:149-162.
* Kisdi E. & S. A. H. Geritz. 1999. Adaptive
dynamics in allele space: Evolution of genetic polymorphism by small mutations
in a heterogeneous environment. Evolution 53:993-1008.
* Koella J. C. & M. Doebeli. 1999. Population dynamics and the e1volution of virulence in epidemiological models with discrete host generations. J. theor. Biol. 198: 461-475
* Jansen V. A. A. & G. S. E. E. Mulder. 1999.
Evolving biodiversity. Ecology Letters 2:379-386.
Johst, K., M. Doebeli and R. Brandl. 1999. Evolution
of complex dynamics in spatially structured populations. Proc. R. Soc. Lond. B
266:1147-1154.
* Parvinen, K. 1999. Evolution of migration in a
metapopulation. Bull. Math. Biol. 61:531-550.
2000
* Day T. 2000. Competition and the effect of spatial
resource heterogeneity on evolutionary diversification. Am. Nat. 155:790-803.
* Doebeli M. & U. Dieckmann. 2000. Evolutionary
branching and sympatric speciation caused by different types of ecological interactions.
Am. Nat. 156:S77-S101.
Levin S. A. & H. C. Muller-Landau. 2000. The
evolution of dispersal and seed size in plant communities. Evol. Ecol. Res.
2:409-435.
2001
* Cheptou P.-O. & A. Mathias. 2001. Can varying
inbreeding depression select for intermediary selfing rate? Am. Nat.
157:361-373
* Day T. 2001. Population structure inhibits
evolutionary diversification under competition for resources. Genetica
112-113:71-86.
* De Jong T. & S. A. H. Geritz. 2001. The role of geitonogamy in the gradual evolution towards dioecy in cosexual plants. Selection 2:133-146. PDF (Courtesy of Akadémiai Kiadó, Budapest)
Gyllenberg M. & K. Parvinen. 2001. Necessary and
sufficient conditions for evolutionary suicide. Bull. Math. Biol. 63:981-993
* Kisdi É. 2001. Long-term adaptive diversity in
Levene-type models. Evol. Ecol. Res. 3:721-727.
* Kisdi É. & S. A. H. Geritz. 2001. Evolutionary
disarmament in interspecific competition. Proc. R. Soc. Lond. B 268:2589-2594.
* Kisdi É., F. J. A. Jacobs and S. A. H. Geritz. 2001. Red Queen evolution by cycles of evolutionary branching and extinction. Selection 2:161-176. PDF (Courtesy of Akadémiai Kiadó, Budapest)
* Law R., J. L. Bronstein & R. Ferriere. 2001. On
mutualists and exploiters: Plant-insect coevolution in pollinating seed-parasite
systems. J. theor. Biol. 212:373-389.
* Maire N., M. Ackermann & M. Doebeli. 2001.
Evolutionary branching and the evolution of anisogamy. Selection 2:119-132.
* Mathias, É. Kisdi & I. Olivieri. 2001. Divergent
evolution of dispersal in a heterogeneous landscape. Evolution 55:246-259.
* Meszéna G. & E. Szathmáry. 2001. Adaptive
dynamics of parabolic replicators. Selection 2:147-160. PDF (Courtesy of Akadémiai Kiadó, Budapest)
2002
Bowers R. G. & A. White. 2002. The adaptive
dynamics of Lotka-Volterra systems with trade-offs. Math. Biosci. 175:67-81.
* Claessen D. & U. Dieckmann. 2002. Ontogenetic
niche shifts and evolutionary branching in size-structured populations. Evol.
Ecol. Res. 4:189-217.
* Day T., P. A. Abrams & J. M. Chase. 2002. The
role of size-specific predation in the evolution and diversification of prey
life histories. Evolution 56:877-887.
* Dercole F. & S. Rinaldi. 2002. Evolution of
cannibalistic traits: Scenarios derived from adaptive dynamics. Theor. Pop.
Biol. 62:365-374.
Dercole F., R. Ferriere & S. Rinaldi. 2002.
Ecological bistability and evolutionary reversals under asymmetric competition.
Evolution 56:1081-1090.
* Doebeli M. 2002. A model for the evolutionary dynamics of cross-feeding polymorphisms in microorganisms.
Popul. Ecol. 44:59-70.
* Ferdy J.-B., L. Depres. & B. Godelle. 2002.
Evolution of mutualism between globeflowers and their pollinating flies. J.
theor. Biol. 217: 219-234.
* Ferriere R., J. I. Bronstein, S. Rinaldi, R. Law
& M. Gauduchon. 2002. Cheating and the evolutionary stability of
mutualisms. Proc. R. Soc. Lond. B 269:773-780.
Gyllenberg M., K. Parvinen & U. Dieckmann. 2002.
Evolutionary suicide and evolution of dispersal in structured metapopulations.
J. Math. Biol. 45:79-105; IIASA Interim Report
IR-00-056
Holland J. N. & D. L. DeAngelis. 2002. Ecological
and evolutionary conditions for fruit abortion to regulate pollinating seed-eaters
and increase plant reproduction. Theor. Pop. Biol. 61:251-263.
Loeuille N., M. Loreau & R. Ferriere. 2002.
Consequences of plant-herbivore coevolution on the dynamics and functioning of
ecosystems. J. theor. Biol. 217:369-381.
* Kisdi É. 2002. Dispersal: Risk spreading versus
local adaptation. Am. Nat. 159:579-596.
* Mathias A. & É. Kisdi. 2002. Adaptive
diversification of germination strategies. Proc. R. Soc. Lond. B 269:151-156.
* Parvinen K. 2002. Evolutionary branching of
dispersal strategies in structured metapopulations. J. Math. Biol. 45:106-124;
also available as a TUCS preprint
Pugliese A. 2002. On the evolutionary coexistence of parasite
strains. Math. Biosci. 177-178:355-375.
2003
* Abrams P. A. 2003. Can adaptive evolution or behaviour lead to diversification of traits determining
a trade-off between foraging gain and predation risk? Evol. Ecol. Res. 5:653-670.
This model exhibits evolutionary branching when evolution is slow as compared to population dynamics,
but faster evolution results in cyclic behaviour rather than in diversification.
* Bowers R. G., A. White, M. Boots, S. A. H. Geritz
& E. Kisdi. 2003. Evolutionary branching/speciation: Contrasting results
from systems with explicit or emergent carrying capacities. Evol. Ecol. Res. 5:883-891.
* Dercole F. 2003. Remarks on branching-extinction
evolutionary cycles. J. Math. Biol. 47:569-580.
* Dercole F., J.-O. Irisson & S. Rinaldi. 2003.
Bifurcation analysis of a prey-predator coevolution model. SIAM J. Appl. Math.
63:1378-1391.
Le Galliard J.-F., R. Ferriere & U. Dieckmann.
2003. The adaptive dynamics of altruism in spatially heterogeneous populations.
Evolution 57:1-17.
Mágori K., B. Oborny, U. Dieckmann & G. Meszéna.
2003. Cooperation and competition in heterogeneous environments: The evolution
of resource sharing in clonal plants. Evol. Ecol. Res. 5:787-817.
Parvinen K., U. Dieckmann, M. Gyllenberg & J. A.
J. Metz. 2003. Evolution of dispersal in metapopulations with local density
dependence and demographic stochasticity. J. evol. Biol. 16:143-153; IIASA Interim Report
IR-00-035
* Schreiber S. J. & G. A. Tobiason. 2003. The
evolution of resource use. J. Math. Biol. 47:56-78
* Van Dooren T. J. M. & O. Leimar. 2003. The evolution
of environmental and genetic sex determination in fluctuating environments.
Evolution 57:2667-2677.
* Vukics A., J. Asboth & G. Meszéna. 2003.
Speciation in multidimensional evolutionary space. Phys. Rev. E 68:41903
2004
* Ackermann M. & M. Doebeli. 2004. Evolution of niche width and adaptive diversification. Evolution 58:2599-2612.
* Bonsall M. B., V. A. A. Jansen & M. P. Hassell. 2004. Life history trade-offs assemble ecological guilds. Science 306:111-114.
* Doebeli M., C. Hauert & T. Killingback. 2004. The evolutionary origin of cooperators and defectors. Science 306:859-862.
* Egas M., U. Dieckmann & M. W. Sabelis. 2004.
Evolution restricts the coexistence of specialists and generalists: The role of
trade-off structure. Am. Nat. 163:518-531.
* Gandon S. 2004. Evolution of multihost parasites. Evolution 58: 455-469.
* Gudelj I., F. van den Bosch & C. A. Gilligan 2004. Transmission rates and adaptive evolution of pathogens in sympatric heterogeneous plant populations. Proc. R. Soc. Lond. B 271: 2187-2194.
Ernande B. & U. Dieckmann. 2004. The evolution of
phenotypic plasticity in spatially structured environments: Implications of
intraspecific competition, plasticity costs and environmental characteristics.
J. evol. Biol. 17:613-628.
* Friesen M. L., G. Saxer, M. Travisano & M.
Doebeli. 2004. Experimental evidence for sympatric ecological diversification
due to frequency-dependent competition in Escherichia coli. Evolution
58:245-260.
Kisdi É. 2004. Conditional dispersal under kin competition: Extension of the Hamilton-May model to brood size-dependent dispersal. Theor. Pop. Biol. 66:369-380.
* Parvinen K. & M. Egas. 2004.
Dispersal and the evolution of specialisation in a two-habitat type metapopulation.
Theor. Pop. Biol. 66:233-248.
2005
* Egas M., M. W Sabelis & U. Dieckmann. 2005. Evolution of specialization and ecological character displacement of herbivores along a gradient of plant quality. Evolution 59:507-520.
* Ferdy J.-B. & B. Godelle. 2005. Diversification of transmission modes and the evolution of mutualism. Am. Nat. 166:613-627.
Le Galliard J.-F., R. Ferriere & U. Dieckmann. 2005. Adaptive evolution of social traits: Origin, trajectories, and correlations of altruism and mobility. Am. Nat. 165:206-225.
* Mágori K., P. Szabó, F. Mizera & G. Meszéna. 2005. Adaptive dynamics on a lattice: Role of spatiality in competition, co-existence and evolutionary branching. Evol. Ecol. Res. 7:1-21.
* Troost T. A., B. W. Kooi & A. L. M. Kooijman. 2005. Ecological specialization of mixotrophic plankton in a mixed water column. Am. Nat. 166:E45-E61.
2006
* Hancock P. J. F. & N. F. Britton. 2006. Adaptive responses to spatial aggregation and habitat destruction in heterogeneous landscapes. Evol. Ecol. Res. 8:1349-1376.
* Ito H. & T. Ikegami. 2006. Food-web formation with recursive evolutionary branching.
J. theor. Biol. 238: 1-10.
This paper models the evolutionary dynamics with a diffusion equation, which is an alternative to the
mutation-limited approach of adaptive dynamics. Diversification nevertheless occurs via a gradual
process similar to evolutionary branching.
Kisdi, E. & S. Liu. 2006. Evolution of handling time can destroy the coexistence of cycling predators. J. evol. Biol. 19:49-58.
* Kooi B. W. & T. A. Troost. 2006. Advantage of storage in a fluctuating environment. Theor. Pop. Biol. 70: 527-541.
* Ma L. & S. A. Levin. 2006. The evolution of resource adaptation: How generalist and specialist consumers evolve. Bull. Math. Biol. 68: 1111-1123.
* Parvinen, K. 2006. Evolution of dispersal in a structured metapopulation model in discrete time. Bull. Math. Biol. 68: 655-678.
* Proulx S. R. & P. C. Phillips. 2006. Allelic divergence precedes and promotes gene duplication. Evolution 60: 881-892.
* Rueffler C., T. J. M. Van Dooren & J. A. J. Metz. 2006. The evolution of resource specialization through frequency-dependent and frequency-independent mechanisms. Am. Nat. 167: 81-93.
* Snyder R. E. 2006. Multiple risk reduction mechanisms: Can dormancy substitute for dispersal? Ecol. Letters 9: 1106-1114.
* Van Dooren T. J. M. 2006. Protected polymorphism and evolutionary stability in pleiotropic models with trait-specific dominance. Evolution 60: 1991-2003.
* Várkonyi P. L., G. Meszéna & G. Domokos. 2006. Emergence of asymmetry in evolution. Theor. Pop. Biol. 70: 63-75.
* White A., J. V. Greenman, T. G. Benton & M. Boots. 2006. Evolutionary behaviour in ecological systems with trade-offs and non-equilibrium population dynamics. Evol. Ecol. Res. 8:387-398.
2007
Broom M. & J. Rychtar. 2007. The evolution of a kleptoparasitic system under adaptive dynamics. J. Math. Biol. 54: 151–177.
* Geritz S. A. H., É. Kisdi & P. Yan. 2007. Evolutionary branching and long-term coexistence of cycling predators: Critical function analysis. Theor. Pop. Biol. 71: 424-435.
* Giafis A. & R. G. Bowers. 2007. The adaptive dynamics of the evolution of host resistance to indirectly transmitted microparasites. Math. Biosci. 210: 668-679.
* Hoyle A. & R. G. Bowers. 2007. When is evolutionary branching in predator–prey systems possible with an explicit carrying capacity? Math. Biosci. 210: 1-16.
* Ito H. C. & M. Shimada. 2007. Niche expansion: Coupled evolutionary branching of niche position and width. Evol. Ecol. Res. 9: 675-695.
* Ito H. C. & U. Dieckmann. 2007. A new mechanism for recurrent adaptive radiations. Am. Nat. 170: E96-E111.
Kamo M., A. Sasaki & M. Boots. 2007. The role of trade-off shapes in the evolution of parasites in spatial host populations: An approximate analytical approach. J. theor. Biol. 244: 588-596.
Mougi A. & K. Nishimura. 2007. Evolution of life-history traits collapses competitive coexistence. J. theor. Biol. 248: 552-559.
* Parvinen K. 2007. Evolutionary suicide in a discrete-time metapopulation model. Evol. Ecol. Res. 9: 619-633.
* Rueffler C., T. J. M. van Dooren & J. A. J. Metz. 2007. The interplay between behavior and morphology in the evolutionary dynamics of resource specialization. Am. Nat. 169: E34-E52.
* Svennungsen T. O. & O. H. Holen. 2007. The evolutionary stability of automimicry. Proc. R. Soc. Lond. B 274: 2055-2062.
* Szilágyi A. & G. Meszéna. 2007. Two-patch model of spatial niche segregation. Evol. Ecol., in press (DOI 10.1007/s10682-007-9212-6)
Troost T. A., B. W. Kooi & S. A. L. M. Kooijman. 2007. Bifurcation analysis can unify ecological and evolutionary aspects of ecosystems. Ecol. Mod. 204: 253-268.
* Wolf M., G. S. van Doorn, O. Leimar & F. J. Weissing. 2007.
Life-history trade-offs favour the evolution of animal personalities. Nature 447: 581-584.
See also Brief communications arising: Do animal personalities emerge? by F. Massol and P.-A. Crochet
and reply by Wolf et al., Nature 451 (2008) pp. E8-E10.
2008
* Best A., A. White & M. Boots. 2008. Maintenance of host variation in tolerance to pathogens and parasites. Proc. Natl. Acad. Sci. 105: 20786-20791.
* Boldin B. & O. Diekmann. 2008. Superinfections can induce evolutionarily stable coexistence of pathogens. J. Math. Biol. 56: 635-672.
Gyllenberg M., E. Kisdi & M. Utz. 2008. Evolution of condition-dependent dispersal under kin competition. J. Math. Biol. 57: 285-307.
Heino M., K. Parvinen & U. Dieckmann. 2008. Evolution of foraging strategies on resource gradients. Evol. Ecol. Res. 10: 1131-1156.
* Nurmi T. & K. Parvinen. 2008. On the evolution of specialization with a mechanistic underpinning in structured metapopulations. Theor. Pop. Biol. 73: 222-243.
* Nurmi T., S. Geritz, K. Parvinen & M. Gyllenberg. 2008. Evolution of specialization in resource utilization in structured metapopulations. J. Biol. Dyn. 3: 297-322.
* Parvinen, K. & J. A. J. Metz. 2008. A novel fitness proxy in structured locally finite metapopulations with diploid genetics, with an application to dispersal evolution. Theor. Pop. Biol. 73: 517-528.
* Troost T. A., B. W. Kooi & U. Dieckmann. 2008. Joint evolution of predator body size and prey-size preference. Evol. Ecol. 22: 771-799.
2009
* Best A., A. White & M. Boots. 2009. The implications of coevolutionary dynamics to host-parasite interactions. Am. Nat. 173: 779-791.
* Boldin B., S. A. H. Geritz & E. Kisdi. 2009. Superinfections and adaptive dynamics of pathogen virulence revisited: A critical function analysis. Evol. Ecol. Res. 11: 153-175.
Geritz, S. A. H., M. Gyllenberg & P. Ondracek. 2009. Evolution of density-dependent dispersal in a structured metapopulation. Math. Biosci. 219: 142-148.
Heino, M., K. Parvinen & U. Dieckmann. 2009. Evolution of foraging strategies on resource gradients. Evol. Ecol. Res. 10: 1131-1156.
Jones E. I., R. Ferriere & J. L. Bronstein. 2009. Eco-evolutionary dynamics of mutualists and exploiters. Am. Nat. 174: 780-794.
* Parvinen K. & G. Meszéna. 2009. Disturbance-generated niche-segregation in a structured metapopulation model. Evol. Ecol. Res. 11: 651-666.
* Rajon E., S. Venner & F. Menu. 2009. Spatially heterogeneous stochasticity and the adaptive diversification of dormancy. J. evol. Biol. 22: 2094-2103.
* Ravigne V., U. Dieckmann & I. Olivieri. 2009. Live where you thrive: Joint evolution of habitat choice and local adaptation facilitates specialization and promotes diversity. Am. Nat. 174: E141-E169.
* Svennungsen T. O. & E. Kisdi. 2009. Evolutionary branching of virulence in a single-infection model. J. theor. Biol. 257: 408-418.
Troost T. A., J. A. van Dam, B. W. Kooi & E. Tuenter. 2009. Seasonality, climate cycles and body size evolution. Math. Model. Nat. Phenom. 4: 135-155.
2010
* Alizon S. & B. Boldin. 2010. Within-host viral evolution in a heterogeneous environment: Insights into the HIV co-receptor switch. J. evol. Biol. 23: 2625–2635.
* Best A., A. White, E. Kisdi, J. Antonovics, M. A. Brockhurst & M. Boots. 2010. The evolution of parasite range. Am. Nat. 176: 63-71.
Cobey S., M. Pascual & U. Dieckmann. 2010. Ecological factors driving the long-term evolution of influenza's host range. Proc. R. Soc. B 277: 2803-2810.
* Debarre F. & S. Gandon. 2010. Evolution of specialization in a spatially continuous environment. J. evol. Biol. 23: 1090-1099.
Evans T., R. G. Bowers & M. Mortimer. 2010. Adaptive dynamics of temperate phages. Evol. Ecol. Res. 413-434.
* Friesen M. L. & A. Mathias. 2010. Mixed infections may promote diversification of mutualistic symbionts: why are there ineffective rhizobia? J. evol. Biol. 23: 323-334.
Kooi B. W. & J. van der Meer. 2010. Bifurcation theory, adaptive dynamics and DEB-structured populations of iteroparous species. Phil. Trans. Roy. Soc. 365: 3579-3590.
* Nilsson J. & J. Ripa. 2010. Adaptive branching in source-sink habitats. Evol. Ecol. 24: 479-489.
* Parvinen K. 2010. Adaptive dynamics of cooperation may prevent the coexistence of defectors and cooperators and even cause extinction. Proc. R. Soc. Lond. B in press (available online, doi:10.1098/rspb.2010.0191)
* Zu J., M. Mimura & J. Y. Wakano. 2010. The evolution of phenotypic traits in a predator-prey system subject to Allee effect. J. theor. Biol. 262: 528-543.
2011
* Aguilée R., B. de Becdelièvre, A. Lambert & D. Claessen. 2011. Under which conditions is character displacement a likely outcome of secondary contact? J. Biol. Dyn. 5: 135-146.
* Best A., S. Webb, A. White & M. Boots. 2011. Host resistance and coevolution in spatially structured populations. Proc. R. Soc. B 278: 2216-2222.
Gyllenberg M., E. Kisdi & M. Utz. 2011. Variability within families and the evolution of body-condition-dependent dispersal. J. Biol. Dyn. 5: 191-211.
Gyllenberg M., E. Kisdi & M. Utz. 2011. Body condition dependent dispersal in a heterogeneous environment. Theor. Pop. Biol. 79: 139-154.
* Herron M. D. & M. Doebeli. 2011. Adaptive diversification of a plastic trait in a predictably fluctuating environment. J. theor. Biol. 285: 58-68.
* Hoyle A., R. G. Bowers & A. White. 2011. Evolutionary behaviour, trade-offs and cyclic and chaotic population dynamics. Bull. Math. Biol. 73: 1154-1169.
* Johnstone R. A. & A. Manica. 2011. Evolution of personality differences in leadership. Proc. Natl. Acad Sci. USA 108: 8373-8378.
* Massol F., A. Duputie, P. David & P. Jarne. 2011. Asymmetric patch size distribution leads to disruptive selection on dispersal. Evolution 65: 490-500.
Metz J. A. J. & O. Leimar. 2011. A simple fitness proxy for structured populations with continuous traits, with case studies on the evolution of haplo-diploids and genetic dimorphisms. J. Biol. Dyn. 5: 163-190.
* Nurmi T. & K. Parvinen. 2011. Joint evolution of specialization and dispersal in structured metpopulations. J. theor. Biol. 275: 78-92.
* K. Parvinen. 2011. Adaptive Dynamics of Altruistic cooperation in a metapopulation: Evolutionary emergence of cooperators and defectors or evolutionary suicide? Bull. Math. Biol. 73: 2605–2626.
* Svardal H., C. Rueffler & J. Hermisson. 2011. Comparing environmental and genetic variance as adaptive response to fluctuating selection. Evolution 65: 2492-2513.
Papers on the
symmetric Lotka-Volterra competition model
Christiansen F. B. & V. Loeschcke. 1980. Evolution
and intraspecific exploitative competition I. One locus theory for small
additive gene effects. Theor. Pop. Biol. 18:297-313.
Slatkin M. 1980. Ecological character displacement.
Ecology 61:163-177.
Loeschcke V. & F. B. Christiansen. 1984. Evolution
and intraspecific exploitative competition. II. A two-locus model for additive
gene effects. Theor. Pop. Biol. 26:228-264.
Taper
M.L. & T.J. Case. 1985. Quantitative genetic
models for the coevolution of character displacement. Ecology 66:355-371.
Christiansen F. B. & V. Loeschcke. 1987. Evolution
and intraspecific competition III. One-locus theory for small additive gene
effects and multidimensional resource qualities. Theor. Pop. Biol. 31:33-46.
Doebeli M. 1996. An explicit genetic model for
ecological character displacement. Ecology 77:510-520.
Metz, J. A. J., S. A. H. Geritz, G. Meszéna, F. J. A.
Jacobs, and J. S. van Heerwaarden. 1996. Adaptive dynamics, a geometrical study
of the consequences of nearly faithful reproduction. Pp. 183-231 in S.
J. van Strien, and S. M. Verduyn Lunel, eds. Stochastic and spatial structures
of dynamical systems. North Holland, Amsterdam, The Netherlands.
Dieckmann U. & M. Doebeli. 1999. On the origin of
species by sympatric speciation. Nature 400:354-357.
Drossel B. & A. McKane. 1999. Ecological character
displacement in quantitative genetic models. J. theor. Biol. 196:363-376.
Day T. 2000. Competition and the effect of spatial
resource heterogeneity on evolutionary diversification. Am. Nat. 155:790-803.
Day T. 2001. Population structure inhibits
evolutionary diversification under competition for resources. Genetica
112-113:71-86.
Doebeli M. & U. Dieckmann. 2003. Speciation along
environmental gradients. Nature 421:259-264.
Mizera F. & G. Meszéna. 2003. Spatial niche packing,
character displacement and adaptive speciation along an environmental gradient.
Evol. Ecol. Res. 5:363-382.
Vukics A., J. Asboth & G. Meszéna. 2003.
Speciation in multidimensional evolutionary space. Phys. Rev. E 68:41903
Ackermann M. & M. Doebeli. 2004. Evolution of niche width and adaptive diversification. Evolution 58:2599-2612.
Mágori K., P. Szabó, F. Mizera & G. Meszéna. 2005. Adaptive dynamics on a lattice: Role of spatiality in competition, co-existence and evolutionary branching. Evol. Ecol. Res. 7:1-21.
Baptestini E. M., M. A. M. de Augiar, D. I. Bolnick & M. S. Araujo. 2009. The shape of the competition and carrying capacity kernels affects the likelihood of disruptive selection. J. theor. Biol. 259: 5-11.
Doebeli M. & I. Ispolatov. 2010. Complexity and diversity. Science 328: 494-497.
Forerunners:
Attracting
fitness minima (in adaptive dynamics, evolutionary branching points) found in
classic studies
Christiansen F. B. & V. Loeschcke. 1980. Evolution
and intraspecific exploitative competition I. One locus theory for small
additive gene effects. Theor. Pop. Biol. 18:297-313.
Hoekstra R. F. 1980. Why do organisms produce gametes
of only two different sizes? Some theoretical aspects of the evolution of
anisogamy. J. theor. Biol. 87:785-793.
van Tienderen P.H. & G. de Jong. 1986. Sex ratio
under the haystack model: Polymorphism may occur. J. theor. Biol. 122:69-81.
Hofbauer J. & K. Sigmund. 1990. Adaptive dynamics
and evolutionary stability. Appl. Math. Lett. 3(4):75-79.
Christiansen F. B. 1991. On conditions for
evolutionary stability for a continuously varying character. Am. Nat.
138:37-50.
Cohen D. & S. A. Levin. 1991. Dispersal in patchy
environments: The effects of temporal and spatial structure. Theor. Pop. Biol.
39:63-99.
Ludwig D., S. A. Levin. 1991. Evolutionary stability
of plant communities and the maintenance of multiple dispersal types. Theor.
Pop. Biol. 40:285-307.
Brown J. S. & N. B. Pavlovic. 1992. Evolution in
heterogeneous environments: Effects of migration on habitat specialization.
Evol. Ecol. 6:360-382.
Brown J. S. & T. L. Vincent. 1992. Organization of
predator-prey communities as an evolutionary game. Evolution 46:1269-1283.
Abrams P. A., H. Matsuda & Y. Harada. 1993.
Evolutionarily unstable fitness maxima and stable fitness minima of continuous
traits. Evol. Ecol. 7:465-487.
Vincent T. L., Y. Cohen & J. S. Brown. 1993.
Evolution via strategy dynamics. Theor. Pop. Biol. 44:149-176.
Law R., P. Marrow & U. Dieckmann. 1997. On
evolution under asymmetric competition. Evol. Ecol. 11:485-501.
Marrow P., U. Dieckmann & R. Law. 1996.
Evolutionary dynamics of predator-prey systems: An ecological perspective. J.
Math. Biol. 34:556-578.
Other approaches to adaptive dynamics
- a sample
Review: Abrams P. A. 2001.
Modelling the adaptive dynamics of traits involved in inter- and intraspecific
interactions: An assessment of three methods. Ecology Letters 4:166-175.
Christiansen F. B. & V. Loeschcke. 1980. Evolution
and intraspecific exploitative competition I. One locus theory for small
additive gene effects. Theor. Pop. Biol. 18:297-313.
Eshel, I. 1996. On the changing concept of
evolutionary population stability as a reflection of a changing point of view
in the quantitative theory of evolution. J. Math. Biol. 34:485-510.
Hammerstein P. 1996. Darwinian adaptation, population
genetics and the streetcar theory of evolution. J. Math. Biol. 34:511-532.
Abrams P. A., H. Matsuda & Y. Harada. 1993.
Evolutionarily unstable fitness maxima and stable fitness minima of continuous
traits. Evol. Ecol. 7:465-487.
Matsuda H. & P.A. Abrams. 1994. Timid consumers:
Self-extinction due to adaptive change in foraging and anti-predator effort.
Theor.Pop.Biol. 45:76-91
Matsuda H. & P.A. Abrams. 1994. Runaway evolution
to self-extinction under asymmetrical competition. Evolution 48:1764-1772.
Abrams P.A. & H. Matsuda. 1994. The evolution of
traits that determine ability in competitive contests. Evol. Ecol. 8:667-686
Abrams P. 1999. The adaptive dynamics of consumer
choice. Am. Nat. 153:83-97.
Marrow P., R. Law & C. Cannings. 1992. The
coevolution of predator-prey interactions: ESSs and Red Queen dynamics. Proc.
R. Soc. Lond. B 250:133-141.
Dieckmann U., P. Marrow & R. Law. 1995.
Evolutionary cycling in predator-prey interactions: Population dynamics and the
Red Queen. J. theor. Biol. 176:91-102.
Marrow P., U. Dieckmann & R. Law. 1996.
Evolutionary dynamics of predator-prey systems: An ecological perspective. J.
Math. Biol. 34:556-578.
Law R., P. Marrow & U. Dieckmann. 1997. On
evolution under asymmetric competition. Evol. Ecol. 11:485-501.
Taylor P. & T. Day. 1997. Evolutionary stability
under the replicator and the gradient dynamics. Evol. Ecol. 11:579-590.
Brown J. S. & T. L. Vincent. 1987. Coevolution as
an evolutionary game. Evolution 41:66-79.
Brown J. S. & T. L. Vincent. 1992. Organization of
predator-prey communities as an evolutionary game. Evolution 46:1269-1283.
Vincent T. L., Y. Cohen & J. S. Brown. 1993.
Evolution via strategy dynamics. Theor. Pop. Biol. 44:149-176.
Cohen Y., T. L. Vincent & J. S. Brown. 1999. A G-function approach to fitness minima, fitness maxima, evolutionarily stable strategies and adaptive landscapes. Evol. Ecol. Res. 1:923-942.
Vincent T. L. & J. S. Brown. 2001. Evolutionarily stable strategies in
multistage biological systems. Selection 2:85-102.
Brown J. S., Y. Cohen & T. L. Vincent. 2007. Adaptive dynamics with vector-valued strategies.
Evol. Ecol. Res. 9: 719-756.
Ripa J., L. Storlind, P. Lundberg & J. S. Brown. 2009. Niche co-evolution in consumer-resource dynamics. Evol. Ecol. Res. 11: 305-323.
Vincent T. L., T. L. S. Vincent & Y. Cohen. 2011. Darwinian dynamics and evolutionary game theory. J. Biol. Dyn. 5: 215-226.
Rael R. C., T. L. Vincent & J. M. Cushing. 2011. Competitive outcomes changed by evolution. J. Biol. Dyn. 5: 227-252.
Cohen Y. 2011. Evolutionary distributions: Producer-consumer pattern formation. J. Biol. Dyn. 5: 253-267.